PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C027301P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 104aa    MW: 11574.5 Da    PI: 6.63
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C027301P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like322.7e-101203655
         G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                    m+vk+Ltl+hvkSHLQ+YR+
  MELO3C027301P1  1 MDVKDLTLAHVKSHLQMYRT 20
                    9******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-8120IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MDVKDLTLAH VKSHLQMYRT VKTTDRAAAA ASSGNSDDVY DQNGSSGDTT NEDTTYENEK  60
SSRMRLDAPI GDPLTHGRFR QTVVVGQDHH RSHKDFHALW SNSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6829021e-116LN682902.1 Cucumis melo genomic scaffold, unanchored_scaffold01093.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008465593.11e-72PREDICTED: probable transcription factor KAN2 isoform X2
SwissprotQ9C6164e-18KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A0A0L1711e-62A0A0A0L171_CUCSA; Uncharacterized protein
STRINGVIT_02s0012g01940.t012e-20(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59683452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-13G2-like family protein